Work Packages
CAGEKID unites clinical and epidemiological skills and resources together large-scale infrastructure for genetics and genomics across Europe to make a major contribution to international efforts to decipher the cancer genome. To implement the programme, we have designed a series of interlocked Work Packages.
WP No. | Work package title | Lead participant short name |
---|---|---|
WP 1 | Sample collection, annotation & verification | UNIVLEEDS |
WP 2 | Preparation and storage of samples for genomic analysis | IARC |
WP 3 | Primary data generation - Mutation detection, expression and DNA methylation analysis based on 2nd generation sequencing | CNG |
WP 4 | Validation of identified molecular alterations in an enlarged sample cohorts | CNG |
WP 5 | Data management and informatics | EBI (EMBL) |
WP 6 | Data analysis and bioinformatics | CNG |
WP 7 | Antibodies to genomically-defined targets | KTH |
WP 8 | Ethical and societal dimensions | INSERM |
WP 9 | Management | CEPH |
WP 10 | Training & dissemination activities | CEPH |